SuNutri
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easy difficulty

Nightshades: Tomatoes, Peppers & Eggplant

Learn to save seeds from tomatoes, peppers, and eggplants using the fermentation method.

10-15 min read
self-pollinated

Overview

Nightshade family plants (tomatoes, peppers, eggplant) are among the easiest vegetables to save seeds from. They're mostly self-pollinating, meaning you can save seeds without worrying too much about cross-pollination. Tomatoes use the fermentation method, while peppers and eggplant seeds can be processed using either wet or dry methods.

Crops Covered:

TomatoesPeppersEggplantTomatillosGround Cherries
Pollination

self-pollinated

Method

fermentation processing

Drying Time

7-14 days

Storage Life

Tomatoes: 4-6 years

Understanding Pollination

Nightshades are primarily self-pollinating. The flowers contain both male and female parts and pollinate themselves before opening fully.

Isolation Distance

10-50 feet for home gardens (commercial: 150+ feet)

Key Tips:

  • Tomatoes rarely cross-pollinate - 10 feet apart is usually sufficient
  • Peppers can cross more readily - use 50+ feet or bag flowers
  • Hot and sweet peppers WILL cross - keep well separated
  • For absolute purity, cover flowers with small bags before opening

Step-by-Step Guide

1Select the Best Fruits

Choose fruits from your healthiest, most productive plants with the best flavor and characteristics.

  • Select fully ripe or slightly overripe fruits
  • Pick from disease-free, vigorous plants
  • Choose fruits that represent the variety's best traits
  • Mark plants early in the season before traits change
  • Never save from the first or last fruits - middle of season is best
2Extract the Seeds

Cut the fruit and remove seeds along with the surrounding gel or pulp.

  • For tomatoes: Cut in half and squeeze seeds with gel into a container
  • For peppers: Cut open and scrape seeds into a bowl
  • For eggplant: Slice overripe fruit and scrape seeds
  • Include the gel (tomatoes) as it contains germination inhibitors to be removed
3Fermentation (Tomatoes)

Ferment tomato seeds to remove the gel coating and kill seed-borne diseases.

  • Add equal amount of water to seeds and gel
  • Cover loosely (not airtight) and label
  • Let sit at room temperature 2-4 days
  • Stir once or twice daily
  • Fermentation is complete when a layer of mold forms on top
  • Don't over-ferment or seeds may sprout
4Clean the Seeds

Rinse thoroughly to remove all pulp and debris.

  • Add more water and stir vigorously
  • Viable seeds will sink; discard floating seeds and debris
  • Pour off the top layer repeatedly
  • Strain through a fine mesh sieve
  • Rinse under running water until completely clean
5Dry and Store

Dry seeds completely before storing to prevent mold.

  • Spread seeds in single layer on coffee filter, paper plate, or screen
  • Label immediately with variety and date
  • Dry in well-ventilated area away from direct sun
  • Stir daily to prevent clumping
  • Seeds are dry when they snap rather than bend (7-14 days)

Harvest Timing

CropHarvest StageDays After Flowering
TomatoesFully ripe to slightly overripe40-60 days
PeppersFully colored and mature (red stage for most)50-70 days
EggplantOverripe - past eating stage, skin dull and brownish50-60 days
TomatillosHusk brown and papery, fruit yellow60-70 days

Processing: Fermentation Method

The fermentation process removes the germination-inhibiting gel from tomato seeds and kills many seed-borne diseases.

  1. 1Combine seeds and gel with equal part water in jar
  2. 2Cover loosely and place in warm location (70-80°F)
  3. 3Stir once or twice daily
  4. 4Process is complete when white mold forms (2-4 days)
  5. 5Add water, let seeds settle, pour off debris
  6. 6Repeat until water runs clear

Drying & Storage

Drying
Duration:

7-14 days

Conditions:

Warm (70-80°F), low humidity, good air circulation, out of direct sunlight

Test for Dryness: Seeds should snap cleanly when bent, not bend or feel rubbery

Storage
Containers:

Paper envelopes, Glass jars with silica gel, Sealed plastic containers

Conditions:

Cool (40-50°F ideal), dark, dry location. Refrigerator or freezer for long-term storage.

Viability:

Tomatoes: 4-6 years, Peppers: 2-4 years, Eggplant: 4-6 years

Storage Tips
  • Always label with variety name and harvest date
  • Include silica gel packets in sealed containers
  • Bring to room temperature before opening to prevent condensation
  • Test germination rate before planting old seeds

Troubleshooting

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